I assume the setting you have in mind isn't a restaurant where you have to PAY for the food .... but more of an at home thing and you want to know if you should complain about someone doing something nice for you because it isn't exactly, 100% perfectly up to your standards.
Answer: NO! You do not complain. You use all the grace you can muster and politely say something like, "Thank you so much for treating me to this special breakfast ... you must really love me" and then you choke down as much as you can without gagging, while continuing to have polite conversation that puts the focus on how much you appreciate how thoughtful and considerate the cook is.
While doing this, eat all the other food that may be on the plate ... toast, fruit, juice, etc. Once you've eaten all of the sunny side up eggs you can, without puking, you may push away your plate and say any number of things to take the persons mind off the fact that you didn't actually eat more than a bite or two ... depending on your relationship. ie: you could suggest getting "frisky" together.
Then ... a some future point ... when there is no chance of hurt feelings .... you can say how much you LOVE your eggs scrambled, how it reminds you of some terrific memory, etc .. You do NOT mention that even looking at sunny-side up eggs makes you want to hurl.
If you handle this situation with grace, love and kindness ... then when YOU mess up and do something that the other person thinks you should have know they didn't care for ... they may just give you the same consideration ... instead of jumping down your throat, causing hurt feelings, resentment and pain all around.