A standard primer is exactly that, it is a "regular" primer.
A benchrest primer is essentually the equivilent of a standard primer, but there are supposedly much more strict quality control to ensure uniformity. Allegedly, there is supposed to be a more uniform measure of explosive, more consistant positioning of the anvil, etc. I've used them in the past and I really didn't see much difference.
A magnum primer is a primer that is a longer, hotter ignition source (esentially, it produces a bigger flame). Magnum primers are usually used with larger powder loads found in magnum cartridges to help ensure more complete and uniform ignition of the powder.
Can you interchange primers in a non-magnum cartridge like the 25-06? For the most part, yes.
You should be able to use standard and benchrest primers interchangeably. You can use magnum primers in any cartridge, but you have to watch for any signs of excessive pressure as the hotter flame can change the pressure characteristics of a load. If you use magnum primers in a non-magnum cartridge, I'd make sure you aren't at the maximum powder charge. Back off a grain or two of powder and work your way back up to make sure you don't have any significant pressure issues.
IMHO, no type of primer is "more accurate" than another; rather, the primer type is just a component in creating an accurate load. There are numerous variables that can be tweeked to change the accuracy of a load. I've replaced a regular primer with a magnum primer and had the load become more accurate. I've also used a magnum primer and had the load become much less accurate. I've used benchrest primers and saw no change.
Magnum primers won't wear your firearm out any faster or slower.
IMHO, one brand of primer is about as good as the next. Most of my life, I used Remington or CCI primers. The brand is jsut another variable in creating an accurate load. The brand can make a difference.
Good Luck and happy shooting